Function unimod_sequence_to_tokens

pub fn unimod_sequence_to_tokens(
    sequence: &str,
    group_modifications: bool,
) -> Vec<String>

Convert a peptide sequence with UNIMOD annotations to a list of tokens

Arguments

• sequence - a string slice of the peptide sequence
• group_modifications - a boolean indicating whether to group the amino acid before the UNIMOD with the UNIMOD

Returns

• Vec<String> - a vector of strings representing the tokens

Example

use mscore::chemistry::utility::unimod_sequence_to_tokens;

let sequence = "PEPTIDE[UNIMOD:1]H";
let tokens = unimod_sequence_to_tokens(sequence, false);
assert_eq!(tokens, vec!["P", "E", "P", "T", "I", "D", "E", "[UNIMOD:1]", "H"]);
let tokens = unimod_sequence_to_tokens(sequence, true);
assert_eq!(tokens, vec!["P", "E", "P", "T", "I", "D", "E[UNIMOD:1]", "H"]);