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Module utility

mscore::chemistry

Module utility 

Source

Functionsยง

find_unimod_patterns
Convert a peptide sequence with UNIMOD annotations to a tuple of plain sequence and for each position in the sequence, the mass of the modification at that position (0 if no modification), which is the representation of sequence nad modifications used by SAGE
reshape_prosit_array
Reshape the flat prosit array into a 3D array of shape (29, 2, 3)
unimod_sequence_to_tokens
Convert a peptide sequence with UNIMOD annotations to a list of tokens