Struct ScoreOpts

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pub struct ScoreOpts {Show 13 fields
    pub w_jacc_rt: f32,
    pub w_shape: f32,
    pub w_rt_apex: f32,
    pub w_im_apex: f32,
    pub w_im_overlap: f32,
    pub w_ms1_intensity: f32,
    pub rt_apex_scale_s: f32,
    pub im_apex_scale_scans: f32,
    pub shape_neutral: f32,
    pub min_sigma_rt: f32,
    pub min_sigma_im: f32,
    pub w_shape_rt_inner: f32,
    pub w_shape_im_inner: f32,
}

Expand description

Scoring knobs. Defaults are conservative and width-aware but won’t punish pairs that lack good fits (we use shape_neutral when shape data is missing).

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§w_jacc_rt: f32

Weight for RT Jaccard.

§w_shape: f32

Weight for shape similarity S_shape.

§w_rt_apex: f32

Weight for RT apex proximity term (smaller delta = better).

§w_im_apex: f32

Weight for IM apex proximity term (smaller delta = better).

§w_im_overlap: f32

Weight for IM overlap ratio.

§w_ms1_intensity: f32

Weight for MS1 raw_sum (log-compressed).

§rt_apex_scale_s: f32

Scales to normalize apex deltas into ~0..1 decays (exp(-delta/scale)).

§im_apex_scale_scans: f32§shape_neutral: f32

If shape is unavailable, use this neutral value instead of 0.

§min_sigma_rt: f32

Floors for σ to avoid division by ~0.

§min_sigma_im: f32§w_shape_rt_inner: f32

Shape component internal weights (multiply z^2 inside exp).

§w_shape_im_inner: f32

Trait Implementations§

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impl Clone for ScoreOpts

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fn clone(&self) -> ScoreOpts

Returns a duplicate of the value. Read more

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fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source. Read more

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impl Debug for ScoreOpts

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more

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impl Default for ScoreOpts

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fn default() -> Self

Returns the “default value” for a type. Read more

Auto Trait Implementations§

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impl UnwindSafe for ScoreOpts

Blanket Implementations§

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impl<T> Any for T
where T: 'static + ?Sized,

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fn type_id(&self) -> TypeId

Gets the TypeId of self. Read more

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impl<T> Borrow<T> for T
where T: ?Sized,

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fn borrow(&self) -> &T

Immutably borrows from an owned value. Read more

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impl<T> BorrowMut<T> for T
where T: ?Sized,

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fn borrow_mut(&mut self) -> &mut T

Mutably borrows from an owned value. Read more

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impl<T> CloneToUninit for T
where T: Clone,

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unsafe fn clone_to_uninit(&self, dest: *mut u8)

🔬This is a nightly-only experimental API. (clone_to_uninit)

Performs copy-assignment from self to dest. Read more

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impl<T> DynClone for T
where T: Clone,

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fn __clone_box(&self, _: Private) -> *mut ()

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impl<T> From<T> for T

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fn from(t: T) -> T

Returns the argument unchanged.

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impl<T, U> Into for T
where U: From<T>,

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fn into(self) -> U

Calls U::from(self).

That is, this conversion is whatever the implementation of From<T> for U chooses to do.

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impl<T> IntoEither for T

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fn into_either(self, into_left: bool) -> Either<Self, Self>

Converts self into a Left variant of Either<Self, Self> if into_left is true. Converts self into a Right variant of Either<Self, Self> otherwise. Read more

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fn into_either_with<F>(self, into_left: F) -> Either<Self, Self>
where F: FnOnce(&Self) -> bool,

Converts self into a Left variant of Either<Self, Self> if into_left(&self) returns true. Converts self into a Right variant of Either<Self, Self> otherwise. Read more

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