Struct IsotopeTransmissionConfig 

pub struct IsotopeTransmissionConfig {
    pub mode: IsotopeTransmissionMode,
    pub min_probability: f64,
    pub max_isotopes: usize,
    pub precursor_survival_min: f64,
    pub precursor_survival_max: f64,
}

Configuration for quad-selection dependent isotope transmission.

When enabled, fragment ion isotope distributions and/or intensities are adjusted based on which precursor isotopes were transmitted through the quadrupole isolation window.

Fields

mode: IsotopeTransmissionMode

Mode for transmission-dependent calculation

min_probability: f64

Minimum probability threshold for isotope transmission

max_isotopes: usize

Maximum number of isotope peaks to consider

precursor_survival_min: f64

Minimum fraction of precursor ions that survive fragmentation intact (0.0-1.0)

precursor_survival_max: f64

Maximum fraction of precursor ions that survive fragmentation intact (0.0-1.0)

Implementations

impl IsotopeTransmissionConfig

pub fn new( mode: IsotopeTransmissionMode, min_probability: f64, max_isotopes: usize, precursor_survival_min: f64, precursor_survival_max: f64, ) -> Self

pub fn precursor_scaling(min_probability: f64) -> Self

Create config with precursor scaling mode

pub fn per_fragment(min_probability: f64, max_isotopes: usize) -> Self

Create config with per-fragment mode

pub fn has_precursor_survival(&self) -> bool

Check if precursor survival is enabled

pub fn is_enabled(&self) -> bool

Check if any transmission mode is enabled

pub fn gated_by(&self, capabilities: InstrumentCapabilities) -> Self

Apply instrument-capability gating (P5e). Mobility-dependent quadrupole isotope transmission (PrecursorScaling / PerFragment) is a Bruker timsTOF behaviour; an instrument that lacks it (e.g. a no-IMS Astral — has_quad_isotope_transmission = false) must NOT apply that scaling, so force the mode to None. Bruker (flag true) is returned unchanged, so the rendered output is byte-identical. (The m/z-isolation vs scan/mobility transmission split is gated by has_tims_mobility and lands in P6 with the Thermo acquisition windows — see the instrument-dispatch plan.)

Trait Implementations

impl Clone for IsotopeTransmissionConfig

fn clone(&self) -> IsotopeTransmissionConfig

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for IsotopeTransmissionConfig

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Default for IsotopeTransmissionConfig

fn default() -> Self

Returns the “default value” for a type.

impl<'de> Deserialize<'de> for IsotopeTransmissionConfig

fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error>

where __D: Deserializer<'de>,

Deserialize this value from the given Serde deserializer.

impl Serialize for IsotopeTransmissionConfig

fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error>

where __S: Serializer,

Serialize this value into the given Serde serializer.