List of all items

Structs

• chemistry::sum_formula::SumFormula
• data::peptide::PeptideIon
• data::peptide::PeptideProductIon
• data::peptide::PeptideProductIonSeries
• data::peptide::PeptideProductIonSeriesCollection
• data::peptide::PeptideSequence
• data::spectrum::IndexedMzSpectrum
• data::spectrum::IndexedMzSpectrumVectorized
• data::spectrum::MzSpectrum
• data::spectrum::MzSpectrumVectorized
• simulation::annotation::ContributionSource
• simulation::annotation::MzSpectrumAnnotated
• simulation::annotation::MzSpectrumAnnotatedVectorized
• simulation::annotation::PeakAnnotation
• simulation::annotation::SignalAttributes
• simulation::annotation::TimsFrameAnnotated
• simulation::annotation::TimsSpectrumAnnotated
• timstof::collision::TimsTofCollisionEnergyDIA
• timstof::frame::ImsFrame
• timstof::frame::ImsFrameVectorized
• timstof::frame::RawTimsFrame
• timstof::frame::TimsFrame
• timstof::frame::TimsFrameVectorized
• timstof::quadrupole::TimsTransmissionDIA
• timstof::slice::TimsPlane
• timstof::slice::TimsSlice
• timstof::slice::TimsSliceFlat
• timstof::slice::TimsSliceVectorized
• timstof::slice::TimsSliceVectorizedFlat
• timstof::spectrum::TimsSpectrum
• timstof::spectrum::TimsSpectrumVectorized

Enums

• data::peptide::FragmentType
• data::spectrum::MsType
• simulation::annotation::SourceType

Traits

• data::spectrum::ToResolution
• data::spectrum::Vectorized
• timstof::collision::TimsTofCollisionEnergy
• timstof::quadrupole::IonTransmission

Functions

• algorithm::isotope::calculate_transmission_dependent_fragment_ion_isotope_distribution
• algorithm::isotope::convolve
• algorithm::isotope::convolve_pow
• algorithm::isotope::factorial
• algorithm::isotope::generate_averagine_spectra
• algorithm::isotope::generate_averagine_spectrum
• algorithm::isotope::generate_isotope_distribution
• algorithm::isotope::generate_isotope_pattern
• algorithm::isotope::generate_precursor_spectra
• algorithm::isotope::generate_precursor_spectrum
• algorithm::isotope::iso
• algorithm::isotope::lam
• algorithm::isotope::normal_pdf
• algorithm::isotope::weight
• algorithm::peptide::atomic_product_ion_composition
• algorithm::peptide::calculate_amino_acid_composition
• algorithm::peptide::calculate_peptide_mono_isotopic_mass
• algorithm::peptide::calculate_peptide_product_ion_mono_isotopic_mass
• algorithm::peptide::calculate_product_ion_mz
• algorithm::peptide::fragments_to_composition
• algorithm::peptide::get_num_protonizable_sites
• algorithm::peptide::peptide_sequence_to_atomic_composition
• algorithm::peptide::simulate_charge_state_for_sequence
• algorithm::peptide::simulate_charge_states_for_sequences
• algorithm::utility::accumulated_intensity_cdf_normal
• algorithm::utility::adaptive_integration
• algorithm::utility::calculate_abundance_gaussian
• algorithm::utility::calculate_bounds_emg
• algorithm::utility::calculate_bounds_gaussian
• algorithm::utility::calculate_bounds_normal
• algorithm::utility::calculate_frame_abundance_emg
• algorithm::utility::calculate_frame_abundances_emg_par
• algorithm::utility::calculate_frame_occurrence_emg
• algorithm::utility::calculate_frame_occurrences_emg_par
• algorithm::utility::calculate_scan_abundances_gaussian_par
• algorithm::utility::calculate_scan_occurrence_gaussian
• algorithm::utility::calculate_scan_occurrences_gaussian_par
• algorithm::utility::custom_cdf_normal
• algorithm::utility::emg_cdf_range
• algorithm::utility::emg_function
• algorithm::utility::normal_cdf_range
• chemistry::amino_acid::amino_acid_composition
• chemistry::amino_acid::amino_acid_masses
• chemistry::amino_acid::amino_acids
• chemistry::elements::atomic_weights_mono_isotopic
• chemistry::elements::atoms_isotopic_weights
• chemistry::elements::isotopic_abundance
• chemistry::formulas::calculate_mz
• chemistry::formulas::ccs_to_one_over_reduced_mobility
• chemistry::formulas::one_over_reduced_mobility_to_ccs
• chemistry::unimod::modification_atomic_composition
• chemistry::unimod::unimod_modifications_mass
• chemistry::unimod::unimod_modifications_mass_numerical
• chemistry::utility::find_unimod_patterns
• chemistry::utility::reshape_prosit_array
• chemistry::utility::unimod_sequence_to_tokens
• timstof::quadrupole::apply_transmission
• timstof::quadrupole::ion_transition_function_midpoint
• timstof::quadrupole::smooth_step
• timstof::quadrupole::smooth_step_up_down

Constants

• chemistry::constants::AVOGADRO
• chemistry::constants::ELEMENTARY_CHARGE
• chemistry::constants::K_BOLTZMANN
• chemistry::constants::MASS_CO
• chemistry::constants::MASS_ELECTRON
• chemistry::constants::MASS_NEUTRON
• chemistry::constants::MASS_NH3
• chemistry::constants::MASS_PROTON
• chemistry::constants::MASS_WATER
• chemistry::constants::STANDARD_PRESSURE
• chemistry::constants::STANDARD_TEMPERATURE